openSNP | rs5

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Note: For some SNPs, testing providers detect the genotype from the opposite strand of DNA, so that the genotypes listed on openSNP don't appear here. In those cases, please replace "A" by "T" or "G" by "C" (and vice-versa).

Publications on this SNP on the Public Library of Science:

First Author	Title	Year of Publication	# of readers
Reza Saberianfar	Global Gene Expression Analysis of Fission Yeast Mutants Impaired in Ser-2 Phosphorylation of the RNA Pol II Carboxy Terminal Domain	2011	2372
Joan McIntyre Caron	Methyl Sulfone Induces Loss of Metastatic Properties and Reemergence of Normal Phenotypes in a Metastatic Cloudman S-91 (M3) Murine Melanoma Cell Line	2010	9894
Richard Reeve	Sequence-Based Prediction for Vaccine Strain Selection and Identification of Antigenic Variability in Foot-and-Mouth Disease Virus	2010	8068
Rajani Kanteti	MET and PI3K/mTOR as a Potential Combinatorial Therapeutic Target in Malignant Pleural Mesothelioma	2014	2354
Sudeep Kumar	Molecular Mining of Alleles in Water Buffalo Bubalus bubalis and Characterization of the TSPY1 and COL6A1 Genes	2011	3811
Ezequiel Mendoza	Drosophila FoxP Mutants Are Deficient in Operant Self-Learning	2014	4506
Maria W. Smith	A New Restriction Endonuclease-Based Method for Highly-Specific Detection of DNA Targets from Methicillin-Resistant Staphylococcus aureus	2014	1867
Liang-Fen Yin	Frequent Gain and Loss of Introns in Fungal Cytochrome b Genes	2012	1695
Jae Myoung Suh	An RGS-Containing Sorting Nexin Controls Drosophila Lifespan	2008	4448
Sina Alexa Trautmann-Lengsfeld	The Perception of Dynamic and Static Facial Expressions of Happiness and Disgust Investigated by ERPs and fMRI Constrained Source Analysis	2013	4148
Assaf Zaritsky	Propagating Waves of Directionality and Coordination Orchestrate Collective Cell Migration	2014	3279
Queenie W. T. Chan	The Worker Honeybee Fat Body Proteome Is Extensively Remodeled Preceding a Major Life-History Transition	2011	4719
Assaf Zaritsky	Emergence of HGF/SF-Induced Coordinated Cellular Motility	2012	3678
Tamar R. van Raalten	Practice Induces Function-Specific Changes in Brain Activity	2008	5552
Ari Kassardjian	The Transcription Factor YY1 Is a Novel Substrate for Aurora B Kinase at G2/M Transition of the Cell Cycle	2012	2903
Nadezhda Tikhmyanova	Dcas Supports Cell Polarization and Cell-Cell Adhesion Complexes in Development	2010	2811
David R. Morgan	Combining Aspirin with Cholecalciferol (Vitamin D₃) – A Potential New Tool for Controlling Possum Populations	2013	4755
Richard E. Dearborn Jr.	Reph, a Regulator of Eph Receptor Expression in the Drosophila melanogaster Optic Lobe	2012	2285
Ricardo A. Gomes	The Proteome Response to Amyloid Protein Expression In Vivo	2012	4022
Carlos Díaz-Castillo	Evaluation of the Role of Functional Constraints on the Integrity of an Ultraconserved Region in the Genus Drosophila	2012	3771
Michael J. Bryan	Evidence for the Intense Exchange of MazG in Marine Cyanophages by Horizontal Gene Transfer	2008	4166
Lisa A. Meadows	Neighbourhood Continuity Is Not Required for Correct Testis Gene Expression in Drosophila	2010	5144
André P Mäurer	Gene Expression Profiles of Chlamydophila pneumoniae during the Developmental Cycle and Iron Depletion–Mediated Persistence	2007	8136
David Morgan	Aerial Prefeeding Followed by Ground Based Toxic Baiting for More Efficient and Acceptable Poisoning of Invasive Small Mammalian Pests	2015	995
Damien Marechal	Dosage of the Abcg1-U2af1 Region Modifies Locomotor and Cognitive Deficits Observed in the Tc1 Mouse Model of Down Syndrome	2015	762
Michael J. Stulberg	A TaqMan-Based Multiplex qPCR Assay and DNA Extraction Method for Phylotype IIB Sequevars 1&2 (Select Agent) Strains of Ralstonia solanacearum	2015	2598
John C. Aldrich	Transgenerational Inheritance of Diet-Induced Genome Rearrangements in Drosophila	2015	3505
Gowri Meiyazhagan	Bioactivity Studies of β-Lactam Derived Polycyclic Fused Pyrroli-Dine/Pyrrolizidine Derivatives in Dentistry: In Vitro, In Vivo and In Silico Studies	2015	1028
Jennifer Lee	Reconstitution of TGFBR2-Mediated Signaling Causes Upregulation of GDF-15 in HCT116 Colorectal Cancer Cells	2015	1035
Takashi Shibano	The Inner Nuclear Membrane Protein Nemp1 Is a New Type of RanGTP-Binding Protein in Eukaryotes	2015	1132
Haydée A. Cunha	Molecular and Morphological Differentiation of Common Dolphins (Delphinus sp.) in the Southwestern Atlantic: Testing the Two Species Hypothesis in Sympatry	2015	2143
Mingqi Li	Tree-Ring Dating of the Reshui-1 Tomb in Dulan County, Qinghai Province, North-West China	2015	2231
Christian Gentili	Chromosome Missegregation Associated with RUVBL1 Deficiency	2015	1332
Randolph F. Helfrich	Selective Modulation of Interhemispheric Functional Connectivity by HD-tACS Shapes Perception	2014	9181
Richelle Sopko	A Systems-Level Interrogation Identifies Regulators of Drosophila Blood Cell Number and Survival	2015	2745
Renfeng Li	Phosphoproteomic Profiling Reveals Epstein-Barr Virus Protein Kinase Integration of DNA Damage Response and Mitotic Signaling	2015	2944
Jessica H. Shinn-Thomas	The EFF-1A Cytoplasmic Domain Influences Hypodermal Cell Fusions in C. elegans But Is Not Dependent on 14-3-3 Proteins	2016	414
Ching Ching Chang	Phosphorylation of Human Choline Kinase Beta by Protein Kinase A: Its Impact on Activity and Inhibition	2016	147

Publications on this SNP on Mendeley

First Author	Title	Pub. Year	# of Readers	DOI
Neha Misra	Assessment of mineral phosphate-solubilizing properties and molecular characterization of zinc-tolerant bacteria.	2012	2	10.1002/jobm.201100257
R Yaparpalvi	Rectal dose-volume dependence on timing of post-seed imaging for 131cs prostate seed implants	2011	1	-
R Stein	Monoclonal antibody targeting of human non-small cell carcinoma of the lung.	1990	1
Teck C Loh	Feeding of different levels of metabolite combinations produced by Lactobacillus plantarum on growth performance, fecal microflora, volatile fatty acids and villi height in broilers.	2010	3	-
J S Kanwal	Parallel medullary gustatospinal pathways in a catfish: possible neural substrates for taste-mediated food search.	1997	5
Giovanni Barisione	Airway distensibility with lung inflation after allogeneic haematopoietic stem-cell transplantation.	2012	1	10.1016/j.resp.2012.07.021
M S Moghadam	Novel Bacteriocinogenic Lactobacillus plantarum Strains and Their Differentiation by Sequence Analysis of 16S rDNA, 16S-23S and 23S-5S Intergenic Spacer Regions and Randomly Amplified Polymorphic DNA Analysis	2010	4
J E Nutt	The role of folate receptor alpha (FRα) in the response of malignant pleural mesothelioma to pemetrexed-containing chemotherapy	2010	2	10.1038/sj.bjc.6605501
E B Spurr	Invertebrates feeding on baits used for vertebrate pest control in New Zealand	1999	19
Valeria Pittalà	5-HT7 receptor ligands: recent developments and potential therapeutic applications.	2007	4	-
E B Spurr	Invertebrates feeding on baits used for vertebrate pest control in New Zealand	1999	11	-
L Liu	Temperature effects on the allosteric responses of native and chimeric aspartate transcarbamoylases.	1998	2	-
Eun-Kyoung Lee	Research Note — Genetic Diversity of Avian Infectious Bronchitis Virus Isolates in Korea Between 2003 and 2006	2008	1	-
Bai Shen Sun	Simultaneous quantification of 19 ginsenosides in black ginseng developed from Panax ginseng by HPLC-ELSD	2009	5	10.1016/j.jpba.2009.03.025
M D Thomas	Use of bait stations for possum and feral cat control	1998	3	-
Binjia Zhang	Structure and enzymatic resistivity of debranched high temperature-pressure treated high-amylose corn starch	2013	4	10.1016/j.jcs.2012.12.006
A B Freeman Hickling G J And Bannock C A	Response of the Skink Oligosoma maccanni (Reptilia: Lacertilia) to Two Vertebrate Pest-control Baits	1996	1	-
M D Thomas	Use of bait stations for possum and feral cat control	1998	3
L Nastac	Advances in the Solidification of IN718 and RS5 Alloys	2001	1	-
Magda Sindičić	Repetitive sequences in Eurasian lynx (Lynx lynx L.) mitochondrial DNA control region.	2012	4	10.3109/19401736.2012.668894
D F Lobach	Nucleotide sequence, expression, and chromosomal mapping of Mrp and mapping of five related sequences.	1993	1	-
J E Nutt	The role of folate receptor alpha (FR alpha) in the response of malignant pleural mesothelioma to pemetrexed-containing chemotherapy	2010	8	10.1038/sj.bjc.6605501
B A Richards-Smith	Fine-structure mapping of the complex locus Odc-rs5 relative to Igk and distal loci.	1992	0	10.1007/BF00444364
M D Thomas	Use of bait stations for possum and feral cat control	1998	3	-
B Ballou	Radioimmunolocation of a heterotransplanted human choriocarcinoma (BeWo) using monoclonal anti-SSEA-1: pharmacokinetics.	1987	0	-
T V Thu	Effects of liquid metabolite combinations produced by Lactobacillus plantarum on growth performance, faeces characteristics, intestinal morphology and diarrhoea incidence in postweaning piglets	2011	2	10.1007/s11250-010-9655-6
Thomas J Walsh	Treatment of aspergillosis: clinical practice guidelines of the Infectious Diseases Society of America.	2008	119	10.1086/525258
Peter J. Heard	Tricarbonylrhenium(I) halide complexes of chiral non-racemic 2-(dioxolanyl)-6-(dioxanyl)pyridine ligands: Synthesis, NMR and DFT calculations	2003	3	10.1016/j.poly.2003.08.012
B A Richards-Smith	Fine-structure mapping of the complex locus Odc-rs5 relative to Igk and distal loci.	1992	0	-
Sung Won Kwon	Liquid chromatographic determination of less polar ginsenosides in processed ginseng	2001	5	10.1016/S0021-9673(01)00869-X
R Stein	A murine monoclonal antibody raised against human non-small cell carcinoma of the lung.	1988	0
T V Thu	Effects of liquid metabolite combinations produced by Lactobacillus plantarum on growth performance, faeces characteristics, intestinal morphology and diarrhoea incidence in postweaning piglets.	2011	2	10.1007/s11250-010-9655-6
R Kohler	Characteristics and DNA-sequence of a cryptic haloalkanoic acid dehalogenase from Agrobacterium tumefaciens RS5	1998	2	-
K J Fowler	Linkage of the murine transforming growth factor alpha gene with Igk, Ly-2, and Fabp1 on chromosome 6.	1993	2	-
Keyur J. Mehta	Rectal Dose-Volume Dependence on Timing of Post-Seed Imaging for 131Cs Prostate Seed Implants	2011	1	10.1016/j.brachy.2011.02.149
Phillip F C Lung	Ultrasonography for Scrotal Masses, Benign and Malignant	2010	3	10.1016/j.cult.2010.05.002
Thomas J Walsh	Treatment of aspergillosis: clinical practice guidelines of the Infectious Diseases Society of America.	2008	177	10.1086/525258
R Köhler	Characteristics and DNA-sequence of a cryptic haloalkanoic acid dehalogenase from Agrobacterium tumefaciens RS5.	1998	0	-
Thomas J Walsh	Treatment of aspergillosis: clinical practice guidelines of the Infectious Diseases Society of America.	2008	55	10.1086/525258
K J Fowler	Linkage of the murine transforming growth factor alpha gene with Igk, Ly-2, and Fabp1 on chromosome 6.	1993	3	S0888-7543(83)71268-1 [pii]\r10.1006/geno.1993.1268
Neha Misra	Assessment of mineral phosphate-solubilizing properties and molecular characterization of zinc-tolerant bacteria.	2012	6	10.1002/jobm.201100257
Neha Misra	Assessment of mineral phosphate-solubilizing properties and molecular characterization of zinc-tolerant bacteria.	2012	4	10.1002/jobm.201100257
Aurélie Egert	Abiotic stress-induced accumulation of raffinose in Arabidopsis leaves is mediated by a single raffinose synthase (RS5, At5g40390).	2013	3	10.1186/1471-2229-13-218
Teck C Loh	Feeding of different levels of metabolite combinations produced by Lactobacillus plantarum on growth performance, fecal microflora, volatile fatty acids and villi height in broilers.	2010	5	10.1111/j.1740-0929.2009.00701.x
Jin Gyun Lee	Inhibitory activity of ginsenosides isolated from processed ginseng on platelet aggregation.	2010	0	-
A T Airey	Consumption and efficacy of rodent baits to Norway rats	2003	4
N T Thanh	Effects of feeding metabolite combinations produced by Lactobacillus plantarum on growth performance, faecal microbial population, small intestine villus height and faecal volatile fatty acids in broilers.	2009	4	10.1080/00071660902873947
R Köhler	Characteristics and DNA-sequence of a cryptic haloalkanoic acid dehalogenase from Agrobacterium tumefaciens RS5.	1998	3	10.1007/s002849900286
C E Airey A T O'Connor	Consumption and efficacy of rodent baits to Norway rats	2003	4	-
Eun-Kyoung Lee	Genetic diversity of avian infectious bronchitis virus isolates in Korea between 2003 and 2006.	2008	1	-
J E Marshall	Consumption of non-toxic baits by grand (Oligosoma grande) and otago (O. otagense) skinks	2007	3
M T Tebano	Is the functional interaction between adenosine A2A receptors and metabotropic glutamate 5 receptors a general mechanism in the brain? Differences and similarities between the striatum and the hippocampus	2006	6	10.1007/s11302-006-9026-y
D F Lobach	Nucleotide sequence, expression, and chromosomal mapping of Mrp and mapping of five related sequences.	1993	1	10.1006/geno.1993.1301
N T Thanh	Effects of feeding metabolite combinations produced by Lactobacillus plantarum on growth performance, faecal microbial population, small intestine villus height and faecal volatile fatty acids in broilers.	2009	3	-
L Liu	Temperature effects on the allosteric responses of native and chimeric aspartate transcarbamoylases.	1998	3	10.1006/jmbi.1998.2054
Peter J Heard	Tricarbonylrhenium(I) halide complexes of chiral non-racemic 2-(dioxolanyl)-6-(dioxanyl)pyridine ligands: synthesis, NMR and DFT calculations	2003	3	-
R Stein	Murine monoclonal antibodies raised against human non-small cell carcinoma of the lung: specificity and tumor targeting.	1990	0
Hélène Nicolai	Velocity fluctuations of a heavy sphere falling through a sedimenting suspension	1996	0	10.1063/1.868885
J S Kanwal	Parallel medullary gustatospinal pathways in a catfish: possible neural substrates for taste-mediated food search.	1997	5	-
Andrea Bacigalupo	Airway distensibility with lung inflation after allogeneic haematopoietic stem-cell transplantation	2012	1	10.1016/j.resp.2012.07.021

Evidence compiled by the Personal Genome Project

There are no results from the Personal Genome Project yet. Please come back later.

Publications listed by Genome.gov

There are no results from genome.gov yet. Please come back later.

Name	rs5
Chromosome	7
Position	92209796
Weight of evidence	136

SNP rs5

Basic Information

Genotype Frequency

Allele Frequency

Additional Information

Links to SNPedia

Publications on this SNP on the Public Library of Science:

Publications on this SNP on Mendeley

Evidence compiled by the Personal Genome Project

Publications listed by Genome.gov

Users who share this SNP:

Genome Browser

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