openSNP | rs1801157

Links to SNPedia

Title	Summary
rs1801157 A/A	1.4x higher risk for breast cancer
rs1801157 A/G	1.4x higher risk for breast cancer
rs1801157 G/G	No summary provided.

Note: For some SNPs, testing providers detect the genotype from the opposite strand of DNA, so that the genotypes listed on openSNP don't appear here. In those cases, please replace "A" by "T" or "G" by "C" (and vice-versa).

Publications on this SNP on the Public Library of Science:

First Author	Title	Year of Publication	# of readers
Jacques Fellay	Common Genetic Variation and the Control of HIV-1 in Humans	2009	20820
Qingzhong Xiao	SDF1 Gene Variation Is Associated with Circulating SDF1α Level and Endothelial Progenitor Cell Number–The Bruneck Study	2008	5777
Jung Pyo Lee	Genetic Predisposition of Donors Affects the Allograft Outcome in Kidney Transplantation; Polymorphisms of Stromal-Derived Factor-1 and CXC Receptor 4	2011	2779
Ketty Gianesin	The Role of Genetic Variants of Stromal Cell-Derived Factor 1 in Pediatric HIV-1 Infection and Disease Progression	2012	1883
Laura Ibáñez	HIV-Infection, Atherosclerosis and the Inflammatory Pathway: Candidate Gene Study in a Spanish HIV-Infected Population	2014	1872
Paul J. McLaren	Association Study of Common Genetic Variants and HIV-1 Acquisition in 6,300 Infected Cases and 7,200 Controls	2013	7204
Asan M. S. Haja Mohideen	Examining the Polymorphisms in the Hypoxia Pathway Genes in Relation to Outcome in Colorectal Cancer	2014	1874
Ke Zhu	The CXCL12 G801A Polymorphism Is Associated with Cancer Risk: A Meta-Analysis	2014	1192
Miriam Schulz	Variant rs1801157 in the 3’UTR of SDF-1ß Does Not Explain Variability of Healthy-Donor G-CSF Responsiveness	2015	666
Qian Zhu	Analysis of Social and Genetic Factors Influencing Heterosexual Transmission of HIV within Serodiscordant Couples in the Henan Cohort	2015	1326
Cody T. Ross	Evolutionary Distance of Amino Acid Sequence Orthologs across Macaque Subspecies: Identifying Candidate Genes for SIV Resistance in Chinese Rhesus Macaques	2015	952

Publications on this SNP on Mendeley

First Author	Title	Pub. Year	# of Readers	DOI
Karen Brajão De Oliveira	CXCL12 rs1801157 polymorphism and expression in peripheral blood from breast cancer patients	2011	0	10.1016/j.cyto.2011.04.017
Karen Brajão de Oliveira	CXCL12 rs1801157 polymorphism in patients with breast cancer, Hodgkin's lymphoma, and non-Hodgkin's lymphoma.	2009	7	10.1002/jcla.20346
Chi-Chung Chang	Stromal cell-derived factor-1 but not its receptor, CXCR4, gene variants increase susceptibility and pathological development of hepatocellular carcinoma.	2009	2	10.1515/CCLM.2009.092
Lei Xi	CXCL12 G801A polymorphism and breast cancer risk: a meta-analysis	2012	1	10.1007/s11033-011-0951-7
Ketty Gianesin	The role of genetic variants of Stromal cell-Derived Factor 1 in pediatric HIV-1 infection and disease progression.	2012	2	10.1371/journal.pone.0044460
Łukasz Kruszyna	CXCL12-3' G801A polymorphism is not a risk factor for breast cancer.	2010	1	10.1089/dna.2010.1030
Carl C Schimanski	SNP rs1801157 significantly correlates with distant metastasis in CXCL12 expressing esophagogastric cancer.	2011	1	10.3892/ijo.2011.1044
Karen Brajão De Oliveira	CXCL12 rs1801157 polymorphism in patients with breast cancer, Hodgkin's lymphoma, and non-Hodgkin's lymphoma.	2009	6	-
Carolina Batista Ariza	CXCL12, CXCR4 and IFNγ genes expression: implications for proinflammatory microenvironment of breast cancer	2012	1	10.1007/s10238-012-0194-5
S N Maley	Genetic variation in CXCL12 and risk of cervical carcinoma: a population-based case-control study.	2009	1	-
W S Modi	Haplotype analysis of the SDF-1 (CXCL12) gene in a longitudinal HIV-1/AIDS cohort study.	2005	8	10.1038/sj.gene.6364258
M Hidalgo-Pascual	Analysis of CXCL12 3'UTR G>A polymorphism in colorectal cancer.	2007	2	-
Chi-Chung Chang	Stromal cell-derived factor-1 but not its receptor, CXCR4, gene variants increase susceptibility and pathological development of hepatocellular carcinoma.	2009	1	-
Carelia Garcia-Moruja	Molecular phenotype of CXCL12beta 3'UTR G801A polymorphism (rs1801157) associated to HIV-1 disease progression.	2009	2	-
Weisheng Shen	CXCL12 G801A polymorphism and breast cancer risk: a meta-analysis.	2012	1	10.1007/s11033-011-0951-7
Carelia Garcia-Moruja	Molecular phenotype of CXCL12beta 3'UTR G801A polymorphism (rs1801157) associated to HIV-1 disease progression.	2009	2	10.2174/157016209788680543
S N Maley	Genetic variation in CXCL12 and risk of cervical carcinoma: a population-based case-control study.	2009	0
S N Maley	Genetic variation in CXCL12 and risk of cervical carcinoma: a population-based case-control study.	2009	1
Karen Brajão De Oliveira	CXCL12 rs1801157 polymorphism in patients with breast cancer, Hodgkin's lymphoma, and non-Hodgkin's lymphoma.	2009	1	10.1002/jcla.20346
M Hidalgo-Pascual	Analysis of CXCL12 3'UTR G>A polymorphism in colorectal cancer.	2007	3
Karen Brajão de Oliveira	CXCL12 rs1801157 polymorphism and expression in peripheral blood from breast cancer patients.	2011	0	10.1016/j.cyto.2011.04.017
Karen Brajão De Oliveira	CXCL12 rs1801157 polymorphism and expression in peripheral blood from breast cancer patients.	2011	0	-
J J Galan	Analysis of CXCL12 3'UTR G>A polymorphism in colorectal cancer.	2007	1	-
W S Modi	Haplotype analysis of the SDF-1 (CXCL12) gene in a longitudinal HIV-1/AIDS cohort study.	2005	0
Binbin Wang	Haplotype analysis of chemokine CXCL12 polymorphisms and susceptibility to premature ovarian failure in Chinese women.	2011	1	10.1093/humrep/der001
Gau-Tyan Lin	Combinational polymorphisms of seven CXCL12-related genes are protective against breast cancer in Taiwan.	2009	2	10.1089/omi.2008.0050
Jung Pyo Lee	Genetic Predisposition of Donors Affects the Allograft Outcome in Kidney Transplantation; Polymorphisms of Stromal-Derived Factor-1 and CXC Receptor 4	2011	3	10.1371/journal.pone.0016710
De Oliveira	CXCL12 rs1801157 Polymorphism in Patients with Breast Cancer , Hodgkin ’ s Lymphoma , and Non-Hodgkin ’ s Lymphoma	2009	1	10.1002/jcla.20346
Bo Luan	Association of the SDF1-3'A polymorphism with susceptibility to myocardial infarction in Chinese Han population.	2010	2	10.1007/s11033-009-9845-3
Bo Luan	Association of the SDF1-3'A polymorphism with susceptibility to myocardial infarction in Chinese Han population.	2010	1	-
Jung Pyo Lee	Genetic predisposition of donors affects the allograft outcome in kidney transplantation; polymorphisms of stromal-derived factor-1 and CXC receptor 4.	2011	5	10.1371/journal.pone.0016710
Carl C Schimanski	SNP rs1801157 significantly correlates with distant metastasis in CXCL12 expressing esophagogastric cancer.	2011	1	10.3892/ijo.2011.1044
Łukasz Kruszyna	CXCL12-3' G801A polymorphism is not a risk factor for breast cancer.	2010	1	10.1089/dna.2010.1030

Evidence compiled by the Personal Genome Project

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Publications listed by Genome.gov

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Name	rs1801157
Chromosome	10
Position	44372809
Weight of evidence	70

SNP rs1801157

Basic Information

Genotype Frequency

Allele Frequency

Additional Information

Links to SNPedia

Publications on this SNP on the Public Library of Science:

Publications on this SNP on Mendeley

Evidence compiled by the Personal Genome Project

Publications listed by Genome.gov

Users who share this SNP:

Genome Browser

Contacts