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SNP rs3024505
Basic Information
Name
rs3024505
Chromosome
1
Position
206766559
Weight of evidence
71
Genotype Frequency
Allele Frequency
Additional Information
SNPedia (1)
PLoS (20)
Mendeley (16)
Personal Genome Project (0)
Genome.gov (5)
Other users (1690)
Comments (0)
Links to SNPedia
Title
Summary
rs3024505 C/C
No summary provided.
Note: For some SNPs, testing providers detect the genotype from the opposite strand of DNA, so that the genotypes listed on openSNP don't appear here. In those cases, please replace "A" by "T" or "G" by "C" (and vice-versa).
Publications on this SNP on the Public Library of Science:
First Author
Title
Year of Publication
# of readers
Yukinori Okada
A Genome-Wide Association Study Identified
AFF1
as a Susceptibility Locus for Systemic Lupus Eyrthematosus in Japanese
2012
7654
Steffen Bank
Polymorphisms in the Inflammatory Pathway Genes
TLR2
,
TLR4
,
TLR9
,
LY96
,
NFKBIA
,
NFKB1
,
TNFA
,
TNFRSF1A
,
IL6R
,
IL10
,
IL23R
,
PTPN22
, and
PPARG
Are Associated with Susceptibility of Inflammatory Bowel Disease in a Danish Cohort
2014
5137
Garima Juyal
An Investigation of Genome-Wide Studies Reported Susceptibility Loci for Ulcerative Colitis Shows Limited Replication in North Indians
2011
4399
Anna Latiano
Associations between Genetic Polymorphisms in
IL-33, IL1R1
and Risk for Inflammatory Bowel Disease
2013
5173
Buhm Han
Interpreting Meta-Analyses of Genome-Wide Association Studies
2012
10042
Deborah S. Cunninghame Graham
Association of
NCF2
,
IKZF1
,
IRF8
,
IFIH1
, and
TYK2
with Systemic Lupus Erythematosus
2011
9757
Sharon A. Chung
Differential Genetic Associations for Systemic Lupus Erythematosus Based on Anti–dsDNA Autoantibody Production
2011
12000
Jonathan P. Bradfield
A Genome-Wide Meta-Analysis of Six Type 1 Diabetes Cohorts Identifies Multiple Associated Loci
2011
15942
Christine Miaskowski
Evidence of Associations between Cytokine Genes and Subjective Reports of Sleep Disturbance in Oncology Patients and Their Family Caregivers
2012
3949
Chizu Tanikawa
Impact of
PSCA
Variation on Gastric Ulcer Susceptibility
2013
2455
Kimberly E. Taylor
Risk Alleles for Systemic Lupus Erythematosus in a Large Case-Control Collection and Associations with Clinical Subphenotypes
2011
10364
Karin Fransen
Limited Evidence for Parent-of-Origin Effects in Inflammatory Bowel Disease Associated Loci
2012
2553
Vibeke Andersen
Interactions between Diet, Lifestyle and
IL10, IL1B
, and
PTGS2/COX-2
Gene Polymorphisms in Relation to Risk of Colorectal Cancer in a Prospective Danish Case-Cohort Study
2013
2805
Cinzia Ciccacci
A Multilocus Genetic Study in a Cohort of Italian SLE Patients Confirms the Association with STAT4 Gene and Describes a New Association with HCP5 Gene
2014
2294
Daisuke Sakurai
Preferential Binding to Elk-1 by SLE-Associated
IL10
Risk Allele Upregulates
IL10
Expression
2013
5074
Marie Louise Max Andersen
Complex
Multi
-
Block Analysis
Identifies New Immunologic and Genetic Disease Progression Patterns Associated with the Residual β-Cell Function 1 Year after Diagnosis of Type 1 Diabetes
2013
2989
Chris Cotsapas
Pervasive Sharing of Genetic Effects in Autoimmune Disease
2011
21388
Rohina Rubicz
A Genome-Wide Integrative Genomic Study Localizes Genetic Factors Influencing Antibodies against Epstein-Barr Virus Nuclear Antigen 1 (EBNA-1)
2013
9845
Ping Liu
IL-10
Gene Polymorphisms and Susceptibility to Systemic Lupus Erythematosus: A Meta-Analysis
2013
2164
Tine Iskov Kopp
Polymorphisms in
NFKB1
and
TLR4
and Interaction with Dietary and Life Style Factors in Relation to Colorectal Cancer in a Danish Prospective Case-Cohort Study
2015
1995
Publications on this SNP on Mendeley
First Author
Title
Pub. Year
# of Readers
DOI
Andre Franke
Sequence variants in IL10, ARPC2 and multiple other loci contribute to ulcerative colitis susceptibility.
2008
77
10.1038/ng.221
Andre Franke
Sequence variants in IL10, ARPC2 and multiple other loci contribute to ulcerative colitis susceptibility.
2008
14
10.1038/ng.221
J D Doecke
Genetic Susceptibility in IBD: Overlap Between Ulcerative Colitis and Crohn's Disease
2013
1
10.1097/MIB.0b013e3182810041
A Franke
Sequence variants in IL10, ARPC2 and multiple other loci contribute to ulcerative colitis susceptibility
2008
2
-
Andre Franke
Sequence variants in IL10, ARPC2 and multiple other loci contribute to ulcerative colitis susceptibility.
2008
44
-
James D Doecke
Genetic susceptibility in IBD: overlap between ulcerative colitis and Crohn's disease.
2013
7
10.1097/MIB.0b013e3182810041
Garima Juyal
An investigation of genome-wide studies reported susceptibility loci for ulcerative colitis shows limited replication in north Indians.
2011
7
10.1371/journal.pone.0016565
J D Doecke
Genetic Susceptibility in IBD: Overlap Between Ulcerative Colitis and Crohn's Disease
2013
1
-
James D Doecke
Genetic Susceptibility in IBD: Overlap Between Ulcerative Colitis and Crohn's Disease.
2013
3
10.1097/MIB.0b013e3182810041
Alice H Wang
The effect of IL-10 genetic variation and interleukin 10 serum levels on Crohn's disease susceptibility in a New Zealand population.
2011
5
-
J D Doecke
Genetic Susceptibility in IBD: Overlap Between Ulcerative Colitis and Crohn's Disease
2013
0
-
Daisuke Sakurai
Preferential Binding to Elk-1 by SLE-Associated IL10 Risk Allele Upregulates IL10 Expression
2013
6
10.1371/journal.pgen.1003870
Garima Juyal
An Investigation of Genome-Wide Studies Reported Susceptibility Loci for Ulcerative Colitis Shows Limited Replication in North Indians
2011
7
10.1371/journal.pone.0016565
James D Doecke
Genetic Susceptibility in IBD: Overlap Between Ulcerative Colitis and Crohn's Disease.
2013
2
10.1097/MIB.0b013e3182810041
Vibeke Andersen
The polymorphism rs3024505 proximal to IL-10 is associated with risk of ulcerative colitis and Crohns disease in a Danish case-control study
2010
10
10.1186/1471-2350-11-82
Andre Franke
How Does the Mind Work? Insights from Biology
2009
2
10.1038/ng.221
Evidence compiled by the
Personal Genome Project
There are no results from the
Personal Genome Project
yet. Please come back later.
Publications listed by
Genome.gov
First Author
Title
Journal
Publication Date
Trait
p-value
Confidence Interval
Barrett JC
Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes.
Nat Genet
05/10/2009
Type 1 diabetes
2.0e-09
[1.10-1.30]
Franke A
Sequence variants in IL10, ARPC2 and multiple other loci contribute to ulcerative colitis susceptibility.
Nat Genet
10/05/2008
Ulcerative colitis
1.0e-12
[1.31-1.62]
Franke A
Genome-wide meta-analysis increases to 71 the number of confirmed Crohn's disease susceptibility loci.
Nat Genet
11/21/2010
Crohn's disease
2.0e-14
[1.07-1.17]
Plagnol V
Genome-wide association analysis of autoantibody positivity in type 1 diabetes cases.
PLoS Genet
08/04/2011
Type 1 diabetes autoantibodies
5.0e-10 (T1D)
[NR]
Anderson CA
Meta-analysis identifies 29 additional ulcerative colitis risk loci, increasing the number of confirmed associations to 47.
Nat Genet
02/06/2011
Ulcerative colitis
6.0e-17
[1.19-1.32]
Users who share this SNP:
Genome Browser